General
Preferred name
GDC-0879
Synonyms
GDC 0879 ()
AR-00341677 ()
GDC0879 ()
P&D ID
PD003366
CAS
905281-76-7
Tags
available
probe
Probe info
Probe selectivity
protein-selective
Probe type
P&D approved
calculated probe
experimental probe
Probe targets
Structure
Probe scores
P&D probe-likeness score
[[ v.score ]]%
Structure formats
[[ format ]]
[[ compound[format === 'MOL' ? 'molblock' : format.toLowerCase()] ]]
Description
(extracted from source data)
DESCRIPTION GDC-0879 is an inhibitor of B-Raf proto-oncogene (BRAF), serine/threonine kinase . It was a preclinical lead compound. PubChem includes four alternative tautomeric forms of this compound. Most sources are linked to CID 11717001 but some assay resulls are linked to CID 57519545. This has a Probe Portal entry SGC GDC-0879 (GtoPdb)
COMMENT The chemotype for this probe is very selective for RAF but is expected to inhibit both mutant and wild-type forms as well as c-RAF. The fact that it is orally bioavailable makes it a very useful probe to interrogate RAF biology. Jun 12 2016 - 4:08am
MOA ATP-competitive inhibitor (Chemical Probes.org)
DESCRIPTION inhibitor of BRAF (Informer Set)
DESCRIPTION Potent B-Raf inhibitor (Tocriscreen Plus)
DESCRIPTION Cyclooxygenase inhibitor; NSAID (Tocris Bioactive Compound Library)
DESCRIPTION GDC-0879, a highly selective, potent, and orally bioavailable RAF small-molecule inhibitor. In GDC-0879-treated mice, both cell line- and patient-derived BRAF(V600E) tumors exhibited stronger and more sustained pharmacodynamic inhibition (>90% for 8 hours) and improved survival compared with mutant KRAS-expressing tumors. Despite the involvement of activated RAF signaling in RAS-induced tumorigenesis, decreased time to progression was observed for some KRAS-mutant tumors following GDC-0879 administration. Moreover, striking differences were noted for RAF and MEK inhibition across a panel of 130 tumor cell lines. Whereas GDC-0879-mediated efficacy was associated strictly with BRAF(V600E) status, MEK inhibition also attenuated proliferation and tumor growth of cell lines expressing wild-type BRAF (81% KRAS mutant, 38% KRAS wild type). The responsiveness of BRAF(V600E) melanoma cells to GDC-0879 could be dramatically altered by pharmacologic and genetic modulation of phosphatidylinositol 3-kinase pathway activity. These data suggest that GDC-0879-induced signaling changes are dependent on the point of oncogenic activation within the RAS network. Taken together, these studies increase our understanding of the molecular determinants for antitumor efficacy resulting from RAF pathway inhibition and have implications for therapeutic intervention in the clinic. (BOC Sciences Bioactive Compounds)
Compound Sets
24
AdooQ Bioactive Compound Library
Axon Medchem Screening Library
BOC Sciences Bioactive Compounds
Cayman Chemical Bioactives
Chemical Probes.org
Concise Guide to Pharmacology 2017/18
Concise Guide to Pharmacology 2019/20
Concise Guide to Pharmacology 2021/22
Concise Guide to Pharmacology 2023/24
Drug Repurposing Hub
EU-OPENSCREEN Bioactive Compound Library
Guide to Pharmacology
High-quality chemical probes
Informer Set
JUMP-MOA Compound Set
LSP-MoA library (Laboratory of Systems Pharmacology)
LSP-OptimalKinase library (Laboratory of Systems Pharmacology)
MedChem Express Bioactive Compound Library
Selleckchem Bioactive Compound Library
TargetMol Bioactive Compound Library
Tocris Bioactive Compound Library
Tocriscreen Plus
Tool Compound Set
ZINC Tool Compounds
External IDs
19
Properties
(calculated by RDKit )
Molecular Weight
334.14
Hydrogen Bond Acceptors
6
Hydrogen Bond Donors
2
Rotatable Bonds
4
Ring Count
4
Aromatic Ring Count
3
cLogP
2.73
TPSA
83.53
Fraction CSP3
0.21
Chiral centers
0.0
Largest ring
6.0
QED
0.57
Structural alerts
0
No structural alerts detected
Custom attributes
(extracted from source data)
Target
BRAF
Serine/threonine-protein kinase B-raf
b-RAF
B-Raf inhibitor
BRAF V600E
Raf
Compound status
probe
Target Type
Enzymes
Pathway
MAPK
MAPK/ERK Pathway
Primary Target
Raf Kinases
MOA
Inhibitor
Raf inhibitor
Target class
Protein kinase
Kinase
Target subclass
TKL
Source data